- 基本信息
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导师姓名：
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李令杰
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学科代码：
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100100
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性别：
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男
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学科名称：
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基础医学
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培养单位：
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基础医学院
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三级学科
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导师类型：
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博士生导师
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专业领域名称：
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联系方式：
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上海市黄浦区重庆南路280号，上海交大医学院西院五号楼509室
lingjie@shsmu.edu.cn
86-21-63846590-776766
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专业领域代码：
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邮编：
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200020
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邮箱地址：
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lingjie@shsmu.edu.cn
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- 研究方向 (点击浏览详细信息)
- 社会任职
- 科研项目
- 学术论文
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王志明, 童冉, 杨晨, 焦慧媛, 王一好, 李林颖, 王烨欣, 张丰,
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基于基因及调控区进化保守性评估细胞和组织发育潜能的定量分析
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上海交通大学学报（医学版)
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2023
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2023, 43(11): 1384-1395.
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Tengteng Yao, Zhe Zhang, Qian Li, Rui Huang, Yanhong Hong, Chen Li, Feng Zhang, Yingying Huang, Yan Fang, Qin Cao, Xiaoliang Jin, Chunliang Li, Zefeng Wang, Xinhua (James) Lin,, Wu Wei, Zhaoyang Wang, Jianfeng Shen
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Long-read sequencing reveals alternative splicing-driven, shared immunogenic neoepitopes regardless SF3B1 status in uveal melanoma.
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Cancer Immunol Res
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2023
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2023 Sep 27. doi: 10.1158/2326-6066.CIR-23-0083.
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Feng Zhang, Huiyuan Jiao, Yihao Wang, Chen Yang, Linying Li, Zhiming Wang , Ran Tong, Junmei Zhou, Jianfeng Shen ,
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InferLoop: leveraging single-cell chromatin accessibility for the signal of chromatin loop
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Briefings in bioinformatics
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2023
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24(3):bbad166. doi: 10.1093/bib/bbad166.
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Linjing Lan, Xin Zhang, Shanxiu Yang,, Xiuguang Mao
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Chromosome-level genome assembly of the Stoliczka's Asian trident bat (Aselliscus stoliczkanus)
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Scientific Data
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2023
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10.1038/s41597-023-02838-0
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Fengqin Fang, Wenqiang Cao, Yunmei Mu, Hirohisa Okuyama,, Jingtao Qiu, Cornelia M. Weyand, J?rg J. Goronzy
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IL-4 prevents adenosine-mediated immunoregulation by inhibiting CD39 expression
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JCI Insight
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2022
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7(12):e157509. doi: 10.1172/jci.insight.157509.
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Qing Ma, Liuyi Yang, Karen Tolentino, Guiping Wang, Yang Zhao, Ulrike M Litzenburger, Quanming Shi, Lin Zhu, Chen Yang, Huiyuan Jiao, Feng Zhang, Rui Li, Miao-Chih Tsai, Jun-An Chen, Ian Lai, Hong Zeng,, Howard Y Chang
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Inducible lncRNA transgenic mice reveal continual role of HOTAIR in promoting breast cancer metastasis
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Elife
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2022
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2022 Dec 29;11:e79126. doi: 10.7554/eLife.79126.
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Feng Zhang, Chen Yang, Yihao Wang, Huiyuan Jiao, Zhiming Wang, Jianfeng Shen,
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FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight
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Briefings in Bioinformatics
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2022
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bbac293. doi: 10.1093/bib/bbac293.
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Wu Yang, Hao He, Tongtong Wang, Nan Su, Feng Zhang, Kai Jiang , Jing Zhu, Chonghe Zhang, Kongyan Niu, Luyue Wang, Xiaodong Yuan, Nan Liu ,, Wu Wei, Junhao Hu
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Single-Cell Transcriptomic Analysis Reveals a Hepatic Stellate Cell-Activation Roadmap and Myofibroblast Origin During Liver Fibrosis in Mice
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Hepatology
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2021
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74(5):2774-2790
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Fengqin Fang, Wenqiang Cao, Weikang Zhu, Nora Lam,, Sadhana Gaddam, Yong Wang, Chulwoo Kim, Simon Lambert, Huimin Zhang, Bin Hu, Donna L. Farber, Cornelia M. Weyand, J?rg J. Goronzy
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The cell-surface 5′-nucleotidase CD73 defines a functional T memory cell subset that declines with age
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CELL REPORTS
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2021
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37(6):109981. doi: 10.1016/j.celrep.2021.109981.
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, Yong Wang, Jessica L Torkelson, Gautam Shankar, Jillian M Pattison, Hanson H Zhen, Fengqin Fang, Zhana Duren, Jingxue Xin, Sadhana Gaddam, Sandra P Melo, Samantha N Piekos, Jiang Li, Eric J Liaw, Lang Chen, Rui Li, Marius Wernig, Wing H Wong, Howard Y Chang, Anthony E Oro
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TFAP2C-and p63-dependent networks sequentially rearrange chromatin landscapes to drive human epidermal lineage commitment
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Cell Stem Cell
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2019
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24 (2), 271-284. e8
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Jingwen Fang, Qing Ma, Ci Chu, Beibei Huang,, Pengfei Cai, Pedro J Batista, Karen Erisse Martin Tolentino, Jin Xu, Rui Li, Pengcheng Du, Kun Qu, Howard Y Chang
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PIRCh-seq: functional classification of non-coding RNAs associated with distinct histone modifications
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Genome Biology
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2019
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20 (1), 1-21
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Jillian M Pattison, Sandra P Melo, Samantha N Piekos, Jessica L Torkelson, Elizaveta Bashkirova, Maxwell R Mumbach, Charlotte Rajasingh, Hanson Hui Zhen,, Eric Liaw, Daniel Alber, Adam J Rubin, Gautam Shankar, Xiaomin Bao, Howard Y Chang, Paul A Khavari, Anthony E Oro
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Retinoic acid and BMP4 cooperate with p63 to alter chromatin dynamics during surface epithelial commitment
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Nature Genetics
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2018
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50 (12), 1658-1665
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, Jill A Helms, Howard Y Chang
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Comment on " Hotair Is Dispensable for Mouse Development"
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PLoS Genet.
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2016
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12 (12), e1006406
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Vittorio Sebastiano, Hanson Hui Zhen, Bahareh Haddad, Elizaveta Bashkirova, Sandra P Melo, Pei Wang, Thomas L Leung, Zurab Siprashvili, Andrea Tichy, Jiang Li, Mohammed Ameen, John Hawkins, Susie Lee,, Aaron Schwertschkow, Gerhard Bauer, Leszek Lisowski, Mark A Kay, Seung K Kim, Alfred T Lane, Marius Wernig, Anthony E Oro
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Human COL7A1-corrected induced pluripotent stem cells for the treatment of recessive dystrophic epidermolysis bullosa
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Science Translational Medicine
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2014
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6 (264), 264ra163-264ra163
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Pedro J Batista, Benoit Molinie, Jinkai Wang, Kun Qu, Jiajing Zhang,, Donna M Bouley, Ernesto Lujan, Bahareh Haddad, Kaveh Daneshvar, Ava C Carter, Ryan A Flynn, Chan Zhou, Kok-Seong Lim, Peter Dedon, Marius Wernig, Alan C Mullen, Yi Xing, Cosmas C Giallourakis, Howard Y Chang
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m6A RNA modification controls cell fate transition in mammalian embryonic stem cells
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Cell Stem Cell
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2014
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15 (6), 707-719
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, Howard Y Chang
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Physiological roles of long noncoding RNAs: insight from knockout mice
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Trends in Cell Biology
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2014
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24 (10), 594-602
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Hongyao Yu, Ke He,, Lei Sun, Fan Tang, Ruizhen Li, Wen Ning, Ying Jin
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Deletion of STK40 protein in mice causes respiratory failure and death at birth
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Journal of Biological Chemistry
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2013
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288 (8), 5342-5352
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, Bo Liu, Orly L Wapinski, Miao-Chih Tsai, Kun Qu, Jiajing Zhang, Jeff C Carlson, Meihong Lin, Fengqin Fang, Rajnish A Gupta, Jill A Helms, Howard Y Chang
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Targeted disruption of Hotair leads to homeotic transformation and gene derepression
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Cell Reports
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2013
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5 (1), 3-12
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, Lei Sun, Furong Gao, Jing Jiang, Ying Yang, Chunliang Li, Junjie Gu, Zhe Wei, Acong Yang, Rui Lu, Yu Ma, Fan Tang, Sung Won Kwon, Yingming Zhao, Jinsong Li, Ying Jin
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Stk40 links the pluripotency factor Oct4 to the Erk/MAPK pathway and controls extraembryonic endoderm differentiation
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Proceedings of the National Academy of Sciences
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2010
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107 (4), 1402-1407
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, 金颖
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调控胚胎干细胞自我更新的关键转录因子研究进展
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Chinese Bulletin of Life Sciences
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2009
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21 (5) 631-638
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王治, 戴秋艳, 吴亚兰, 徐国彤,, 孙宝贵
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p α-MHC/EGFP 小鼠胚胎干细胞株的构建及其向心肌细胞分化的观察
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上海交通大學學報 (醫學版)
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2008
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28 (8), 957-961
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